CRISPRone

CRISPRone report for GCA_004373565.1_ASM437356v1

♦ Seq 1: RWSP01000002.1 Pseudomonas aeruginosa strain PAC14B IPC137_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 923484 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 309285-319796 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 309285-310046 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 309285-310046 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 310111-310410 bp Gene: cd09719:cas1 Type: universal Location: 310407-311297 bp Gene: pfam08798:cas6e Type: other Location: 311324-311863 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 311910-312572 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 312574-313716 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 313726-314256 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 314253-315821 bp Gene: cd09641:cas3HD Type: Type-I Location: 315824-318505 bp CRISPR array Location: 319279-319796 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 319279-319796 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 309285-310046 bp]: array | spacers
           [Locus range 319279-319796 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)