CRISPRone

CRISPRone report for GCA_004373655.1_ASM437365v1

♦ Seq 1: RWRH01000003.1 Pseudomonas aeruginosa strain PAC38B IPC173_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 704139 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207588-208216 bp Zoom in on locus 1 x11 CRISPR array Location: 207588-208216 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 207588-208216 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207588-208216 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWRH01000018.1 Pseudomonas aeruginosa strain PAC38B IPC173_18.1, whole genome shotgun sequence

⇒Summary: seq-len = 72115 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22184-33510 bp Zoom in on locus 1 x22 x19 CRISPR array Location: 22184-23473 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 22184-23473 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 23733-24707 bp Gene: COG1203:cas3 Type: Type-I Location: 24704-27934 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 28345-29646 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29633-30616 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 30627-31655 bp Gene: cd09739:cas6f Type: other Location: 31659-32222 bp CRISPR array Location: 32407-33510 bp Num of repeats: 19 Spacers: s22-s39 CRISPR array Location: 32407-33510 bp Num of repeats: 19 Spacers: s22-s39 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 22184-23473 bp]: array | spacers
           [Locus range 32407-33510 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)