CRISPRone

CRISPRone report for GCA_004373725.1_ASM437372v1

♦ Seq 1: RWRK01000003.1 Pseudomonas aeruginosa strain PAC98C IPC170_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 850114 bp; # of CRISPR array = 1; # of cas gene = 3  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 411658-412525 bp 2 Locus 2: 843047-849093 bp Zoom in on locus 1 x15 Zoom in on locus 2 CRISPR array Location: 411658-412525 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 411658-412525 bp Num of repeats: 15 Spacers: s1-s14 Gene: cls000170:cas4 Type: Type-I Location: 843047-844591 bp Gene: unk Type: unknown Location: 845675-845854 bp Gene: pfam00078:RT Type: other Location: 846586-847302 bp Gene: unk Type: unknown Location: 847346-848011 bp Gene: unk Type: unknown Location: 848200-848508 bp Gene: pfam00078:RT Type: other Location: 848560-849093 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 411658-412525 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWRK01000016.1 Pseudomonas aeruginosa strain PAC98C IPC170_16.1, whole genome shotgun sequence

⇒Summary: seq-len = 76854 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28933-39311 bp Zoom in on locus 1 x16 x15 CRISPR array Location: 28933-29861 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 28933-29861 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09718:cas1 Type: universal Location: 30121-31095 bp Gene: COG1203:cas3 Type: Type-I Location: 31092-34322 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 34380-35684 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 35671-36654 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 36665-37693 bp Gene: cd09739:cas6f Type: other Location: 37697-38260 bp CRISPR array Location: 38444-39311 bp Num of repeats: 15 Spacers: s16-s29 CRISPR array Location: 38444-39311 bp Num of repeats: 15 Spacers: s16-s29 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 28933-29861 bp]: array | spacers
           [Locus range 38444-39311 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)