CRISPRone

CRISPRone report for GCA_004373745.1_ASM437374v1

♦ Seq 1: RWRQ01000003.1 Pseudomonas aeruginosa strain PAC42A IPC164_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 850343 bp; # of CRISPR array = 1; # of cas gene = 3  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 411527-412754 bp 2 Locus 2: 843276-849322 bp Zoom in on locus 1 x21 Zoom in on locus 2 CRISPR array Location: 411527-412754 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 411527-412754 bp Num of repeats: 21 Spacers: s1-s20 Gene: cls000170:cas4 Type: Type-I Location: 843276-844820 bp Gene: unk Type: unknown Location: 845904-846083 bp Gene: pfam00078:RT Type: other Location: 846815-847531 bp Gene: unk Type: unknown Location: 847575-848240 bp Gene: unk Type: unknown Location: 848429-848737 bp Gene: pfam00078:RT Type: other Location: 848789-849322 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 411527-412754 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWRQ01000016.1 Pseudomonas aeruginosa strain PAC42A IPC164_16.1, whole genome shotgun sequence

⇒Summary: seq-len = 76796 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28933-39311 bp Zoom in on locus 1 x16 x15 CRISPR array Location: 28933-29861 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 28933-29861 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09718:cas1 Type: universal Location: 30121-31095 bp Gene: COG1203:cas3 Type: Type-I Location: 31092-34322 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 34380-35684 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 35671-36654 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 36665-37693 bp Gene: cd09739:cas6f Type: other Location: 37697-38260 bp CRISPR array Location: 38444-39311 bp Num of repeats: 15 Spacers: s16-s29 CRISPR array Location: 38444-39311 bp Num of repeats: 15 Spacers: s16-s29 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 28933-29861 bp]: array | spacers
           [Locus range 38444-39311 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)