CRISPRone

CRISPRone report for GCA_004373845.1_ASM437384v1

♦ Seq 1: RWSK01000022.1 Pseudomonas aeruginosa strain PAC56B IPC143_22.1, whole genome shotgun sequence

⇒Summary: seq-len = 49142 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 352-10780 bp Zoom in on locus 1 x9 x17 CRISPR array Location: 352-860 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 352-860 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09718:cas1 Type: universal Location: 1120-2094 bp Gene: COG1203:cas3 Type: Type-I Location: 2091-5321 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5732-7033 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7020-8003 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8014-9042 bp Gene: cd09739:cas6f Type: other Location: 9046-9609 bp CRISPR array Location: 9793-10780 bp Num of repeats: 17 Spacers: s9-s24 CRISPR array Location: 9793-10780 bp Num of repeats: 17 Spacers: s9-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 352-860 bp]: array | spacers
           [Locus range 9793-10780 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWSK01000008.1 Pseudomonas aeruginosa strain PAC56B IPC143_8.1, whole genome shotgun sequence

⇒Summary: seq-len = 326127 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 209144-210250 bp Zoom in on locus 1 x19 CRISPR array Location: 209144-210250 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 209144-210250 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 209144-210250 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)