CRISPRone

CRISPRone report for GCA_004373875.1_ASM437387v1

♦ Seq 1: RWSU01000026.1 Pseudomonas aeruginosa strain PAC13A IPC131_26.1, whole genome shotgun sequence

⇒Summary: seq-len = 52983 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32691-44027 bp Zoom in on locus 1 x54 CRISPR array Location: 32691-36235 bp Num of repeats: 54 Spacers: s1-s53 CRISPR array Location: 32691-36235 bp Num of repeats: 54 Spacers: s1-s53 Gene: cd09725:cas2 Type: universal Location: 36417-36707 bp Gene: cd09721:cas1 Type: universal Location: 36717-37757 bp Gene: pfam01930:cas4 Type: Type-I Location: 37761-38393 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 38412-39281 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 39278-41071 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 41068-41742 bp Gene: cd09641:cas3HD Type: Type-I Location: 41793-44027 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 32691-36235 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWSU01000005.1 Pseudomonas aeruginosa strain PAC13A IPC131_5.1, whole genome shotgun sequence

⇒Summary: seq-len = 396687 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 95849-96297 bp Zoom in on locus 1 x8 CRISPR array Location: 95849-96297 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 95849-96297 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 95849-96297 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)