CRISPRone

CRISPRone report for GCA_004373965.1_ASM437396v1

♦ Seq 1: RWTB01000010.1 Pseudomonas aeruginosa strain PAC10A IPC124_10.1, whole genome shotgun sequence

⇒Summary: seq-len = 209912 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 208649-209397 bp Zoom in on locus 1 x13 CRISPR array Location: 208649-209397 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 208649-209397 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 208649-209397 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWTB01000015.1 Pseudomonas aeruginosa strain PAC10A IPC124_15.1, whole genome shotgun sequence

⇒Summary: seq-len = 49305 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38193-48792 bp Zoom in on locus 1 x19 x10 CRISPR array Location: 38193-39301 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 38193-39301 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 39484-40047 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40051-41079 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41090-42073 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42060-43361 bp Gene: COG1203:cas3 Type: Type-I Location: 43772-47002 bp Gene: cd09718:cas1 Type: universal Location: 46999-47973 bp CRISPR array Location: 48225-48792 bp Num of repeats: 10 Spacers: s19-s27 CRISPR array Location: 48225-48792 bp Num of repeats: 10 Spacers: s19-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38193-39301 bp]: array | spacers
           [Locus range 48225-48792 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)