CRISPRone

CRISPRone report for GCA_004373975.1_ASM437397v1

♦ Seq 1: RWSR01000004.1 Pseudomonas aeruginosa strain PAC117A IPC134_4.1, whole genome shotgun sequence

⇒Summary: seq-len = 395241 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 94266-94714 bp Zoom in on locus 1 x8 CRISPR array Location: 94266-94714 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 94266-94714 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 94266-94714 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWSR01000010.1 Pseudomonas aeruginosa strain PAC117A IPC134_10.1, whole genome shotgun sequence

⇒Summary: seq-len = 237223 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18426-29762 bp Zoom in on locus 1 x54 CRISPR array Location: 18426-21970 bp Num of repeats: 54 Spacers: s1-s53 CRISPR array Location: 18426-21970 bp Num of repeats: 54 Spacers: s1-s53 Gene: cd09725:cas2 Type: universal Location: 22152-22442 bp Gene: cd09721:cas1 Type: universal Location: 22452-23492 bp Gene: pfam01930:cas4 Type: Type-I Location: 23496-24128 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 24147-25016 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 25013-26806 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 26803-27477 bp Gene: cd09641:cas3HD Type: Type-I Location: 27528-29762 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 18426-21970 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)