CRISPRone

CRISPRone report for GCA_004374305.1_ASM437430v1

♦ Seq 1: RWTV01000002.1 Pseudomonas aeruginosa strain 318S170811BSL_PA2 IPC72_2.1, whole genome shotgun sequence

⇒Summary: seq-len = 704052 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207588-208156 bp Zoom in on locus 1 x10 CRISPR array Location: 207588-208156 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 207588-208156 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207588-208156 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWTV01000024.1 Pseudomonas aeruginosa strain 318S170811BSL_PA2 IPC72_24.1, whole genome shotgun sequence

⇒Summary: seq-len = 54026 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 327-895 bp Zoom in on locus 1 x10 CRISPR array Location: 327-895 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 327-895 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 327-895 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RWTV01000032.1 Pseudomonas aeruginosa strain 318S170811BSL_PA2 IPC72_32.1, whole genome shotgun sequence

⇒Summary: seq-len = 11785 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 305-11452 bp Zoom in on locus 1 x16 x22 CRISPR array Location: 305-1230 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 305-1230 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09739:cas6f Type: other Location: 1414-1977 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1981-3009 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3020-4003 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3990-5291 bp Gene: COG1203:cas3 Type: Type-I Location: 5702-8932 bp Gene: cd09718:cas1 Type: universal Location: 8929-9903 bp CRISPR array Location: 10164-11452 bp Num of repeats: 22 Spacers: s16-s36 CRISPR array Location: 10164-11452 bp Num of repeats: 22 Spacers: s16-s36 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 305-1230 bp]: array | spacers
           [Locus range 10164-11452 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)