CRISPRone

CRISPRone report for GCA_004374425.1_ASM437442v1

♦ Seq 1: RWUH01000012.1 Pseudomonas aeruginosa strain 272S250511BSL_PA1 IPC57_12.1, whole genome shotgun sequence

⇒Summary: seq-len = 220013 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 53171-63615 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 53171-53859 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 53171-53859 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 54108-54671 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 54675-55703 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 55714-56697 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 56684-57988 bp Gene: COG1203:cas3 Type: Type-I Location: 58046-61276 bp Gene: cd09718:cas1 Type: universal Location: 61273-62247 bp CRISPR array Location: 62508-63615 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 62508-63615 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 53171-53859 bp]: array | spacers
           [Locus range 62508-63615 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)