CRISPRone

CRISPRone report for GCA_004375535.1_ASM437553v1

♦ Seq 1: RWUT01000001.1 Pseudomonas aeruginosa strain 192S190811BSL_PA1 IPC43_1.1, whole genome shotgun sequence

⇒Summary: seq-len = 1260275 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 803459-813355 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 803459-804373 bp Gene: unk Type: unknown Location: 804705-805343 bp Gene: unk Type: unknown Location: 805343-806245 bp Gene: mkCas0090:PD-DExK Type: other Location: 806272-807012 bp Gene: pfam09702:csa5gr11 Type: Subtype-I-A Location: 813059-813355 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWUT01000003.1 Pseudomonas aeruginosa strain 192S190811BSL_PA1 IPC43_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 617152 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 114958-115465 bp Zoom in on locus 1 x9 CRISPR array Location: 114958-115465 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 114958-115465 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 114958-115465 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: RWUT01000010.1 Pseudomonas aeruginosa strain 192S190811BSL_PA1 IPC43_10.1, whole genome shotgun sequence

⇒Summary: seq-len = 241470 bp; # of CRISPR array = 0; # of cas gene = 3  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 156767-160560 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 156767-158845 bp Gene: pfam13280:WYL Type: other Location: 158847-159752 bp Gene: pfam09002:csx1 Type: Type-III Location: 160084-160560 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)