CRISPRone

CRISPRone report for GCA_004375595.1_ASM437559v1

♦ Seq 1: RWVF01000019.1 Pseudomonas aeruginosa strain 44s031011BSL_PA1 IPC30_19.1, whole genome shotgun sequence

⇒Summary: seq-len = 127480 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 87612-98412 bp Zoom in on locus 1 x15 x23 CRISPR array Location: 87612-88480 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 87612-88480 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 88664-89227 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 89231-90259 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 90270-91253 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 91240-92544 bp Gene: COG1203:cas3 Type: Type-I Location: 92602-95832 bp Gene: cd09718:cas1 Type: universal Location: 95829-96803 bp CRISPR array Location: 97064-98412 bp Num of repeats: 23 Spacers: s15-s36 CRISPR array Location: 97064-98412 bp Num of repeats: 23 Spacers: s15-s36 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 87612-88480 bp]: array | spacers
           [Locus range 97064-98412 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)