CRISPRone

CRISPRone report for GCA_004375625.1_ASM437562v1

♦ Seq 1: RWVE01000025.1 Pseudomonas aeruginosa strain 44s031011BSL_PA2 IPC31_25.1, whole genome shotgun sequence

⇒Summary: seq-len = 80608 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37712-48512 bp Zoom in on locus 1 x15 x23 CRISPR array Location: 37712-38580 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 37712-38580 bp Num of repeats: 15 Spacers: s1-s14 Gene: cd09739:cas6f Type: other Location: 38764-39327 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39331-40359 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40370-41353 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41340-42644 bp Gene: COG1203:cas3 Type: Type-I Location: 42702-45932 bp Gene: cd09718:cas1 Type: universal Location: 45929-46903 bp CRISPR array Location: 47164-48512 bp Num of repeats: 23 Spacers: s15-s36 CRISPR array Location: 47164-48512 bp Num of repeats: 23 Spacers: s15-s36 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37712-38580 bp]: array | spacers
           [Locus range 47164-48512 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)