CRISPRone

CRISPRone report for GCA_004378725.1_ASM437872v1

♦ Seq 1: RWRS01000013.1 Pseudomonas aeruginosa strain PAC31A IPC162_13.1, whole genome shotgun sequence

⇒Summary: seq-len = 77276 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 29355-39733 bp Zoom in on locus 1 x16 x15 CRISPR array Location: 29355-30283 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 29355-30283 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09718:cas1 Type: universal Location: 30543-31517 bp Gene: COG1203:cas3 Type: Type-I Location: 31514-34744 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 34802-36106 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 36093-37076 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37087-38115 bp Gene: cd09739:cas6f Type: other Location: 38119-38682 bp CRISPR array Location: 38866-39733 bp Num of repeats: 15 Spacers: s16-s29 CRISPR array Location: 38866-39733 bp Num of repeats: 15 Spacers: s16-s29 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 29355-30283 bp]: array | spacers
           [Locus range 38866-39733 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWRS01000003.1 Pseudomonas aeruginosa strain PAC31A IPC162_3.1, whole genome shotgun sequence

⇒Summary: seq-len = 850347 bp; # of CRISPR array = 1; # of cas gene = 3  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 411531-412758 bp 2 Locus 2: 843280-849326 bp Zoom in on locus 1 x21 Zoom in on locus 2 CRISPR array Location: 411531-412758 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 411531-412758 bp Num of repeats: 21 Spacers: s1-s20 Gene: cls000170:cas4 Type: Type-I Location: 843280-844824 bp Gene: unk Type: unknown Location: 845908-846087 bp Gene: pfam00078:RT Type: other Location: 846819-847535 bp Gene: unk Type: unknown Location: 847579-848244 bp Gene: unk Type: unknown Location: 848433-848741 bp Gene: pfam00078:RT Type: other Location: 848793-849326 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 411531-412758 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)