CRISPRone

CRISPRone report for GCA_004378755.1_ASM437875v1

♦ Seq 1: RWUU01000044.1 Pseudomonas aeruginosa strain 175S070312EX2DAY21_PA2 IPC42_44.1, whole genome shotgun sequence

⇒Summary: seq-len = 13229 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2398-13186 bp Zoom in on locus 1 x17 x15 CRISPR array Location: 2398-3386 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 2398-3386 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09739:cas6f Type: other Location: 3569-4132 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 4136-5164 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 5175-6158 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6145-7446 bp Gene: COG1203:cas3 Type: Type-I Location: 7857-11087 bp Gene: cd09718:cas1 Type: universal Location: 11084-12058 bp CRISPR array Location: 12319-13186 bp Num of repeats: 15 Spacers: s17-s30 CRISPR array Location: 12319-13186 bp Num of repeats: 15 Spacers: s17-s30 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2398-3386 bp]: array | spacers
           [Locus range 12319-13186 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: RWUU01000010.1 Pseudomonas aeruginosa strain 175S070312EX2DAY21_PA2 IPC42_10.1, whole genome shotgun sequence

⇒Summary: seq-len = 197955 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 54634-55741 bp Zoom in on locus 1 x19 CRISPR array Location: 54634-55741 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 54634-55741 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 54634-55741 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)