CRISPRone

CRISPRone report for GCA_004684395.1_ASM468439v1

♦ Seq 1: SRJU01000279.1 Clostridioides difficile strain MCD45 MCD45_279, whole genome shotgun sequence

⇒Summary: seq-len = 38875 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8258-8678 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SRJU01000159.1 Clostridioides difficile strain MCD45 MCD45_159, whole genome shotgun sequence

⇒Summary: seq-len = 1343 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SRJU01000167.1 Clostridioides difficile strain MCD45 MCD45_167, whole genome shotgun sequence

⇒Summary: seq-len = 18485 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4838-5064 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SRJU01000206.1 Clostridioides difficile strain MCD45 MCD45_206, whole genome shotgun sequence

⇒Summary: seq-len = 851 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 635-865 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SRJU01000243.1 Clostridioides difficile strain MCD45 MCD45_243, whole genome shotgun sequence

⇒Summary: seq-len = 3911 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 744-971 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SRJU01000024.1 Clostridioides difficile strain MCD45 MCD45_24, whole genome shotgun sequence

⇒Summary: seq-len = 5048 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SRJU01000091.1 Clostridioides difficile strain MCD45 MCD45_91, whole genome shotgun sequence

⇒Summary: seq-len = 8333 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4729-5414 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SRJU01000208.1 Clostridioides difficile strain MCD45 MCD45_208, whole genome shotgun sequence

⇒Summary: seq-len = 8742 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6452-6812 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SRJU01000108.1 Clostridioides difficile strain MCD45 MCD45_108, whole genome shotgun sequence

⇒Summary: seq-len = 51635 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SRJU01000124.1 Clostridioides difficile strain MCD45 MCD45_124, whole genome shotgun sequence

⇒Summary: seq-len = 1015 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-756 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: SRJU01000022.1 Clostridioides difficile strain MCD45 MCD45_22, whole genome shotgun sequence

⇒Summary: seq-len = 5142 bp; # of CRISPR array = 0; # of cas gene = 3  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: SRJU01000053.1 Clostridioides difficile strain MCD45 MCD45_53, whole genome shotgun sequence

⇒Summary: seq-len = 1165 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4-1091 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: SRJU01000240.1 Clostridioides difficile strain MCD45 MCD45_240, whole genome shotgun sequence

⇒Summary: seq-len = 11519 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 869-1426 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: SRJU01000046.1 Clostridioides difficile strain MCD45 MCD45_46, whole genome shotgun sequence

⇒Summary: seq-len = 7678 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6391-6553 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 15: SRJU01000073.1 Clostridioides difficile strain MCD45 MCD45_73, whole genome shotgun sequence

⇒Summary: seq-len = 13698 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7666-8024 bp]: array | spacers
           [Locus range 9691-10181 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)