CRISPRone

CRISPRone report for GCA_004684405.1_ASM468440v1

♦ Seq 1: SRJT01000200.1 Clostridioides difficile strain MCD49 MCD49_200, whole genome shotgun sequence

⇒Summary: seq-len = 9305 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 367-858 bp]: array | spacers
           [Locus range 2523-2948 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SRJT01000202.1 Clostridioides difficile strain MCD49 MCD49_202, whole genome shotgun sequence

⇒Summary: seq-len = 2213 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1989-2214 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SRJT01000085.1 Clostridioides difficile strain MCD49 MCD49_85, whole genome shotgun sequence

⇒Summary: seq-len = 13954 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10434-10661 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SRJT01000231.1 Clostridioides difficile strain MCD49 MCD49_231, whole genome shotgun sequence

⇒Summary: seq-len = 67633 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 43632-44189 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SRJT01000082.1 Clostridioides difficile strain MCD49 MCD49_82, whole genome shotgun sequence

⇒Summary: seq-len = 6899 bp; # of CRISPR array = 1; # of cas gene = 3  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 6668-6895 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SRJT01000201.1 Clostridioides difficile strain MCD49 MCD49_201, whole genome shotgun sequence

⇒Summary: seq-len = 1850 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-293 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SRJT01000099.1 Clostridioides difficile strain MCD49 MCD49_99, whole genome shotgun sequence

⇒Summary: seq-len = 5843 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SRJT01000300.1 Clostridioides difficile strain MCD49 MCD49_300, whole genome shotgun sequence

⇒Summary: seq-len = 5168 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4700-5121 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SRJT01000310.1 Clostridioides difficile strain MCD49 MCD49_310, whole genome shotgun sequence

⇒Summary: seq-len = 117063 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SRJT01000292.1 Clostridioides difficile strain MCD49 MCD49_292, whole genome shotgun sequence

⇒Summary: seq-len = 14347 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 436-796 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: SRJT01000012.1 Clostridioides difficile strain MCD49 MCD49_12, whole genome shotgun sequence

⇒Summary: seq-len = 14895 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8672-8898 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: SRJT01000158.1 Clostridioides difficile strain MCD49 MCD49_158, whole genome shotgun sequence

⇒Summary: seq-len = 1229 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: SRJT01000042.1 Clostridioides difficile strain MCD49 MCD49_42, whole genome shotgun sequence

⇒Summary: seq-len = 3479 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 734-896 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: SRJT01000047.1 Clostridioides difficile strain MCD49 MCD49_47, whole genome shotgun sequence

⇒Summary: seq-len = 733 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2-692 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)