CRISPRone

CRISPRone report for GCA_004684495.1_ASM468449v1

♦ Seq 1: SRJZ01000217.1 Clostridioides difficile strain MCD10 MCD10_217, whole genome shotgun sequence

⇒Summary: seq-len = 26000 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SRJZ01000141.1 Clostridioides difficile strain MCD10 MCD10_141, whole genome shotgun sequence

⇒Summary: seq-len = 7940 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7444-7539 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SRJZ01000151.1 Clostridioides difficile strain MCD10 MCD10_151, whole genome shotgun sequence

⇒Summary: seq-len = 950 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-949 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SRJZ01000024.1 Clostridioides difficile strain MCD10 MCD10_24, whole genome shotgun sequence

⇒Summary: seq-len = 31980 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7363-8252 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SRJZ01000085.1 Clostridioides difficile strain MCD10 MCD10_85, whole genome shotgun sequence

⇒Summary: seq-len = 16460 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7387-7743 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SRJZ01000103.1 Clostridioides difficile strain MCD10 MCD10_103, whole genome shotgun sequence

⇒Summary: seq-len = 79935 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 50538-50697 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SRJZ01000215.1 Clostridioides difficile strain MCD10 MCD10_215, whole genome shotgun sequence

⇒Summary: seq-len = 733 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3-162 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SRJZ01000176.1 Clostridioides difficile strain MCD10 MCD10_176, whole genome shotgun sequence

⇒Summary: seq-len = 3058 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59-219 bp]: array | spacers
           [Locus range 2887-2982 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SRJZ01000018.1 Clostridioides difficile strain MCD10 MCD10_18, whole genome shotgun sequence

⇒Summary: seq-len = 7002 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4823-5377 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SRJZ01000118.1 Clostridioides difficile strain MCD10 MCD10_118, whole genome shotgun sequence

⇒Summary: seq-len = 105405 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 101501-102515 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: SRJZ01000088.1 Clostridioides difficile strain MCD10 MCD10_88, whole genome shotgun sequence

⇒Summary: seq-len = 18807 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 9696-11169 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: SRJZ01000133.1 Clostridioides difficile strain MCD10 MCD10_133, whole genome shotgun sequence

⇒Summary: seq-len = 3804 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3225-3716 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: SRJZ01000001.1 Clostridioides difficile strain MCD10 MCD10_1, whole genome shotgun sequence

⇒Summary: seq-len = 648 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 340-630 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)