CRISPRone

CRISPRone report for GCA_004684585.1_ASM468458v1

♦ Seq 1: SRKH01000049.1 Clostridioides difficile strain JIR8504 8504_49, whole genome shotgun sequence

⇒Summary: seq-len = 52926 bp; # of CRISPR array = 1; # of cas gene = 3  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 52434-52925 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SRKH01000037.1 Clostridioides difficile strain JIR8504 8504_37, whole genome shotgun sequence

⇒Summary: seq-len = 5146 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4729-5152 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SRKH01000020.1 Clostridioides difficile strain JIR8504 8504_20, whole genome shotgun sequence

⇒Summary: seq-len = 54677 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2-361 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SRKH01000042.1 Clostridioides difficile strain JIR8504 8504_42, whole genome shotgun sequence

⇒Summary: seq-len = 91589 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38254-38615 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SRKH01000052.1 Clostridioides difficile strain JIR8504 8504_52, whole genome shotgun sequence

⇒Summary: seq-len = 161180 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 118205-118366 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SRKH01000076.1 Clostridioides difficile strain JIR8504 8504_78, whole genome shotgun sequence

⇒Summary: seq-len = 28401 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17675-17902 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SRKH01000087.1 Clostridioides difficile strain JIR8504 8504_89, whole genome shotgun sequence

⇒Summary: seq-len = 1550 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4-1552 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SRKH01000072.1 Clostridioides difficile strain JIR8504 8504_73, whole genome shotgun sequence

⇒Summary: seq-len = 332375 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59744-60037 bp]: array | spacers
           [Locus range 268179-268600 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SRKH01000055.1 Clostridioides difficile strain JIR8504 8504_55, whole genome shotgun sequence

⇒Summary: seq-len = 234851 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 3-164 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SRKH01000084.1 Clostridioides difficile strain JIR8504 8504_86, whole genome shotgun sequence

⇒Summary: seq-len = 25645 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 25529-25627 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)