CRISPRone

CRISPRone report for GCA_004684755.1_ASM468475v1

♦ Seq 1: SRKO01000047.1 Clostridioides difficile strain CD106 CD106_50, whole genome shotgun sequence

⇒Summary: seq-len = 14022 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13799-14024 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SRKO01000072.1 Clostridioides difficile strain CD106 CD106_75, whole genome shotgun sequence

⇒Summary: seq-len = 61232 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 60780-61201 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SRKO01000033.1 Clostridioides difficile strain CD106 CD106_35, whole genome shotgun sequence

⇒Summary: seq-len = 19056 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17772-19056 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SRKO01000024.1 Clostridioides difficile strain CD106 CD106_25, whole genome shotgun sequence

⇒Summary: seq-len = 2514 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 40-330 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SRKO01000059.1 Clostridioides difficile strain CD106 CD106_62, whole genome shotgun sequence

⇒Summary: seq-len = 63881 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 63630-63790 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SRKO01000049.1 Clostridioides difficile strain CD106 CD106_52, whole genome shotgun sequence

⇒Summary: seq-len = 91599 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 90905-91596 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SRKO01000078.1 Clostridioides difficile strain CD106 CD106_81, whole genome shotgun sequence

⇒Summary: seq-len = 156535 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-291 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SRKO01000091.1 Clostridioides difficile strain CD106 CD106_94, whole genome shotgun sequence

⇒Summary: seq-len = 80897 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 31-190 bp]: array | spacers
           [Locus range 80801-80894 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: SRKO01000061.1 Clostridioides difficile strain CD106 CD106_64, whole genome shotgun sequence

⇒Summary: seq-len = 28801 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10038-10723 bp]: array | spacers
           [Locus range 12428-12649 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: SRKO01000015.1 Clostridioides difficile strain CD106 CD106_16, whole genome shotgun sequence

⇒Summary: seq-len = 192953 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 192769-192931 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: SRKO01000092.1 Clostridioides difficile strain CD106 CD106_95, whole genome shotgun sequence

⇒Summary: seq-len = 236809 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 32-329 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: SRKO01000021.1 Clostridioides difficile strain CD106 CD106_22, whole genome shotgun sequence

⇒Summary: seq-len = 390495 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 189764-190121 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: SRKO01000041.1 Clostridioides difficile strain CD106 CD106_44, whole genome shotgun sequence

⇒Summary: seq-len = 3478 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 403-693 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)