CRISPRone

CRISPRone report for GCA_004684765.1_ASM468476v1

♦ Seq 1: SRHR01000100.1 Pseudomonas aeruginosa strain F815101 contig00099, whole genome shotgun sequence

⇒Summary: seq-len = 14406 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 13511-14378 bp Zoom in on locus 1 x15 CRISPR array Location: 13511-14378 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 13511-14378 bp Num of repeats: 15 Spacers: s1-s14 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 13511-14378 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SRHR01000047.1 Pseudomonas aeruginosa strain F815101 contig00017, whole genome shotgun sequence

⇒Summary: seq-len = 52985 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 49002-51042 bp Zoom in on locus 1 Gene: mkCas0131:cas8b5 Type: Subtype-I-B Location: 49002-50009 bp Gene: unk Type: unknown Location: 50013-50324 bp Gene: cd06127:DEDDh Type: Type-I Location: 50413-51042 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SRHR01000045.1 Pseudomonas aeruginosa strain F815101 contig00002, whole genome shotgun sequence

⇒Summary: seq-len = 56490 bp; # of CRISPR array = 0; # of cas gene = 4  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4477-14338 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 4477-6087 bp Gene: pfam13280:WYL Type: other Location: 6248-7264 bp Gene: unk Type: unknown Location: 8228-8467 bp Gene: unk Type: unknown Location: 8536-8715 bp Gene: unk Type: unknown Location: 9025-9558 bp Gene: pfam13280:WYL Type: other Location: 9573-10448 bp Gene: unk Type: unknown Location: 10498-10866 bp Gene: unk Type: unknown Location: 10932-11579 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 11972-14338 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)