CRISPRone

CRISPRone report for GCA_004765765.1_ASM476576v1

♦ Seq 1: SGDK01000157.1 Pseudomonas aeruginosa strain 92 scaffold_156, whole genome shotgun sequence

⇒Summary: seq-len = 4754 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-4587 bp Zoom in on locus 1 Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2-328 bp Gene: COG1203:cas3 Type: Type-I Location: 386-3616 bp Gene: cd09718:cas1 Type: universal Location: 3613-4587 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SGDK01001393.1 Pseudomonas aeruginosa strain 92 scaffold_1392, whole genome shotgun sequence

⇒Summary: seq-len = 1438 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-1437 bp Zoom in on locus 1 Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3-1094 bp Gene: pfam09614:cas5f Type: Subtype-I-F Location: 1081-1437 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SGDK01001048.1 Pseudomonas aeruginosa strain 92 scaffold_1047, whole genome shotgun sequence

⇒Summary: seq-len = 1829 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-1826 bp Zoom in on locus 1 Gene: cd09739:cas6f Type: other Location: 2-127 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 131-1159 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1170-1826 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SGDK01002443.1 Pseudomonas aeruginosa strain 92 scaffold_2442, whole genome shotgun sequence

⇒Summary: seq-len = 716 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-678 bp Zoom in on locus 1 x12 CRISPR array Location: 0-678 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 0-678 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-678 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SGDK01001516.1 Pseudomonas aeruginosa strain 92 scaffold_1515, whole genome shotgun sequence

⇒Summary: seq-len = 1314 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 694-1321 bp Zoom in on locus 1 x11 CRISPR array Location: 694-1321 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 694-1321 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 694-1321 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)