CRISPRone

CRISPRone report for GCA_004785815.1_ASM478581v1

♦ Seq 1: SRPM01000042.1 Pseudomonas aeruginosa strain CCBH3462 scaffold_41, whole genome shotgun sequence

⇒Summary: seq-len = 37690 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18750-29363 bp Zoom in on locus 1 x40 Gene: cd09735:cas8f Type: Subtype-I-F Location: 18750-19124 bp CRISPR array Location: 18952-21571 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 18952-21571 bp Num of repeats: 40 Spacers: s1-s39 Gene: unk Type: unknown Location: 19167-20204 bp Gene: unk Type: unknown Location: 21024-21536 bp Gene: cd09725:cas2 Type: universal Location: 21753-22043 bp Gene: cd09721:cas1 Type: universal Location: 22053-23093 bp Gene: pfam01930:cas4 Type: Type-I Location: 23097-23729 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 23748-24617 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 24614-26407 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 26404-27078 bp Gene: cd09641:cas3HD Type: Type-I Location: 27129-29363 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 18952-21571 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)