CRISPRone

CRISPRone report for GCA_004796135.1_ASM479613v1

♦ Seq 1: SEIC01002121.1 Pseudomonas aeruginosa strain 66 scaffold_2120, whole genome shotgun sequence

⇒Summary: seq-len = 715 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 26-714 bp Zoom in on locus 1 x12 CRISPR array Location: 26-714 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 26-714 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 26-714 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SEIC01001571.1 Pseudomonas aeruginosa strain 66 scaffold_1570, whole genome shotgun sequence

⇒Summary: seq-len = 1148 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-971 bp Zoom in on locus 1 Gene: cd09718:cas1 Type: universal Location: 3-971 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SEIC01001413.1 Pseudomonas aeruginosa strain 66 scaffold_1412, whole genome shotgun sequence

⇒Summary: seq-len = 1305 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 114-1302 bp Zoom in on locus 1 Gene: cd09736:cas5f Type: Subtype-I-F Location: 114-1097 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1084-1302 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SEIC01000372.1 Pseudomonas aeruginosa strain 66 scaffold_371, whole genome shotgun sequence

⇒Summary: seq-len = 3548 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 494-1242 bp Zoom in on locus 1 x13 CRISPR array Location: 494-1242 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 494-1242 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 494-1242 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SEIC01000308.1 Pseudomonas aeruginosa strain 66 scaffold_307, whole genome shotgun sequence

⇒Summary: seq-len = 3997 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2946-3995 bp Zoom in on locus 1 x18 CRISPR array Location: 2946-3995 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 2946-3995 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 2946-3995 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SEIC01001042.1 Pseudomonas aeruginosa strain 66 scaffold_1041, whole genome shotgun sequence

⇒Summary: seq-len = 1761 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-1770 bp Zoom in on locus 1 x3 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1-873 bp Gene: cd09739:cas6f Type: other Location: 877-1440 bp CRISPR array Location: 1624-1770 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 1624-1770 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1624-1770 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)