CRISPRone

CRISPRone report for GCA_004798525.1_ASM479852v1

♦ Seq 1: SSKJ01000207.1 Bacteroides fragilis strain BFR_KZ03 NODE_207_length_1220_cov_1.88403_ID_413, whole genome shotgun sequence

⇒Summary: seq-len = 1220 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-715 bp Zoom in on locus 1 Gene: cd09641:cas3HD Type: Type-I Location: 1-162 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 224-715 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SSKJ01000003.1 Bacteroides fragilis strain BFR_KZ03 NODE_3_length_387213_cov_14.843_ID_5, whole genome shotgun sequence

⇒Summary: seq-len = 387213 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 118494-122107 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 118494-119162 bp Gene: unk Type: unknown Location: 119165-119938 bp Gene: unk Type: unknown Location: 119946-121211 bp Gene: pfam13280:WYL Type: other Location: 121208-122107 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SSKJ01000073.1 Bacteroides fragilis strain BFR_KZ03 NODE_73_length_3143_cov_1.39455_ID_145, whole genome shotgun sequence

⇒Summary: seq-len = 3143 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-2939 bp Zoom in on locus 1 x4 Gene: mkCas0088:cas7 Type: Subtype-I-B Location: 1-645 bp Gene: pfam01930:cas4 Type: Type-I Location: 813-1223 bp Gene: cd09722:cas1 Type: universal Location: 1220-1444 bp Gene: cd09722:cas1 Type: universal Location: 1426-2235 bp Gene: cd09725:cas2 Type: universal Location: 2238-2396 bp CRISPR array Location: 2717-2939 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 2717-2939 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2717-2939 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SSKJ01000009.1 Bacteroides fragilis strain BFR_KZ03 NODE_9_length_163489_cov_16.7221_ID_17, whole genome shotgun sequence

⇒Summary: seq-len = 163489 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 155279-162510 bp Zoom in on locus 1 x7 Gene: cd09643:cas9 Type: Subtype-II-C Location: 155279-159589 bp Gene: unk Type: unknown Location: 159605-159997 bp Gene: unk Type: unknown Location: 160195-160503 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 160623-161555 bp Gene: pfam09827:cas2 Type: Subtype-II-C Location: 161559-161891 bp CRISPR array Location: 162002-162510 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 162002-162510 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 162002-162510 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)