CRISPRone

CRISPRone report for GCA_005786645.1_ASM578664v1

♦ Seq 1: VALF01000003.1 Clostridioides difficile strain WCH065050, whole genome shotgun sequence

⇒Summary: seq-len = 280786 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 82744-83034 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VALF01000005.1 Clostridioides difficile strain WCH065050, whole genome shotgun sequence

⇒Summary: seq-len = 197076 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 195086-196303 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VALF01000001.1 Clostridioides difficile strain WCH065050, whole genome shotgun sequence

⇒Summary: seq-len = 408406 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VALF01000004.1 Clostridioides difficile strain WCH065050, whole genome shotgun sequence

⇒Summary: seq-len = 200903 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 125836-127505 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VALF01000035.1 Clostridioides difficile strain WCH065050, whole genome shotgun sequence

⇒Summary: seq-len = 23375 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20873-22082 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VALF01000049.1 Clostridioides difficile strain WCH065050, whole genome shotgun sequence

⇒Summary: seq-len = 2489 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 791-951 bp]: array | spacers
           [Locus range 1013-1828 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VALF01000002.1 Clostridioides difficile strain WCH065050, whole genome shotgun sequence

⇒Summary: seq-len = 336463 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91430-91718 bp]: array | spacers
           [Locus range 199591-200015 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VALF01000008.1 Clostridioides difficile strain WCH065050, whole genome shotgun sequence

⇒Summary: seq-len = 139365 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 61669-62754 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VALF01000018.1 Clostridioides difficile strain WCH065050, whole genome shotgun sequence

⇒Summary: seq-len = 94865 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 90039-90333 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)