CRISPRone

CRISPRone report for GCA_005893145.1_ASM589314v1

♦ Seq 1: VAOQ01003125.1 Pseudomonas aeruginosa strain ATCC 10145 6666666.414137.crispr_array.3, whole genome shotgun sequence

⇒Summary: seq-len = 1048 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 60-1048 bp Zoom in on locus 1 x17 CRISPR array Location: 60-1048 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 60-1048 bp Num of repeats: 17 Spacers: s1-s16 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 60-1048 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VAOQ01003121.1 Pseudomonas aeruginosa strain ATCC 10145 6666666.414137.peg.3253, whole genome shotgun sequence

⇒Summary: seq-len = 1305 bp; # of CRISPR array = 0; # of cas gene = 1  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-1305 bp Zoom in on locus 1 Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1-1305 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VAOQ01000407.1 Pseudomonas aeruginosa strain ATCC 10145 6666666.414137.peg.423, whole genome shotgun sequence

⇒Summary: seq-len = 369 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 39-366 bp Zoom in on locus 1 x6 CRISPR array Location: 39-366 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 39-366 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 39-366 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VAOQ01003123.1 Pseudomonas aeruginosa strain ATCC 10145 6666666.414137.peg.3255, whole genome shotgun sequence

⇒Summary: seq-len = 1029 bp; # of CRISPR array = 0; # of cas gene = 1  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-1029 bp Zoom in on locus 1 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1-1029 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VAOQ01000406.1 Pseudomonas aeruginosa strain ATCC 10145 6666666.414137.crispr_array.1, whole genome shotgun sequence

⇒Summary: seq-len = 868 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 61-868 bp Zoom in on locus 1 x14 CRISPR array Location: 61-868 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 61-868 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 61-868 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VAOQ01003118.1 Pseudomonas aeruginosa strain ATCC 10145 6666666.414137.peg.3250, whole genome shotgun sequence

⇒Summary: seq-len = 426 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 18-405 bp Zoom in on locus 1 x7 CRISPR array Location: 18-405 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 18-405 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 18-405 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VAOQ01003119.1 Pseudomonas aeruginosa strain ATCC 10145 6666666.414137.peg.3251, whole genome shotgun sequence

⇒Summary: seq-len = 975 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-975 bp Zoom in on locus 1 Gene: cd09718:cas1 Type: universal Location: 1-975 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VAOQ01003117.1 Pseudomonas aeruginosa strain ATCC 10145 6666666.414137.crispr_array.2, whole genome shotgun sequence

⇒Summary: seq-len = 988 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-929 bp Zoom in on locus 1 x16 CRISPR array Location: 1-929 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 1-929 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-929 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VAOQ01003122.1 Pseudomonas aeruginosa strain ATCC 10145 6666666.414137.peg.3254, whole genome shotgun sequence

⇒Summary: seq-len = 984 bp; # of CRISPR array = 0; # of cas gene = 1  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-984 bp Zoom in on locus 1 Gene: cd09736:cas5f Type: Subtype-I-F Location: 1-984 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)