CRISPRone

CRISPRone report for GCA_006864585.1_ASM686458v1

♦ Seq 1: QJGW01000037.1 Pseudomonas aeruginosa strain EPIC E190 NODE_37_length_47237_cov_158.134, whole genome shotgun sequence

⇒Summary: seq-len = 47237 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36538-46200 bp Zoom in on locus 1 x13 x6 CRISPR array Location: 36538-37286 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 36538-37286 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09739:cas6f Type: other Location: 37469-38032 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38036-39064 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39075-40058 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40045-41349 bp Gene: COG1203:cas3 Type: Type-I Location: 41407-44637 bp Gene: cd09718:cas1 Type: universal Location: 44634-45608 bp CRISPR array Location: 45873-46200 bp Num of repeats: 6 Spacers: s13-s17 CRISPR array Location: 45873-46200 bp Num of repeats: 6 Spacers: s13-s17 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36538-37286 bp]: array | spacers
           [Locus range 45873-46200 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)