CRISPRone

CRISPRone report for GCA_007000295.1_ASM700029v1

♦ Seq 1: SERQ01000021.1 Clostridioides difficile strain LC5-008-8 NODE_21_length_11527_cov_26.0428, whole genome shotgun sequence

⇒Summary: seq-len = 11527 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2650-2877 bp]: array | spacers
           [Locus range 5544-5705 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SERQ01000018.1 Clostridioides difficile strain LC5-008-8 NODE_18_length_62574_cov_21.048, whole genome shotgun sequence

⇒Summary: seq-len = 62574 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 56667-58273 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SERQ01000001.1 Clostridioides difficile strain LC5-008-8 NODE_1_length_779411_cov_23.6592, whole genome shotgun sequence

⇒Summary: seq-len = 779411 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 239542-239702 bp]: array | spacers
           [Locus range 483386-483941 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SERQ01000008.1 Clostridioides difficile strain LC5-008-8 NODE_8_length_203641_cov_22.3875, whole genome shotgun sequence

⇒Summary: seq-len = 203641 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91338-92226 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SERQ01000005.1 Clostridioides difficile strain LC5-008-8 NODE_5_length_277766_cov_24.6268, whole genome shotgun sequence

⇒Summary: seq-len = 277766 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 190361-191375 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SERQ01000015.1 Clostridioides difficile strain LC5-008-8 NODE_15_length_99524_cov_21.8599, whole genome shotgun sequence

⇒Summary: seq-len = 99524 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18319-18807 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SERQ01000003.1 Clostridioides difficile strain LC5-008-8 NODE_3_length_311386_cov_20.6338, whole genome shotgun sequence

⇒Summary: seq-len = 311386 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 252969-253063 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SERQ01000002.1 Clostridioides difficile strain LC5-008-8 NODE_2_length_422963_cov_25.1705, whole genome shotgun sequence

⇒Summary: seq-len = 422963 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 256300-257772 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)