CRISPRone

CRISPRone report for GCA_007000385.1_ASM700038v1

♦ Seq 1: SERN01000001.1 Clostridioides difficile strain LC5-008-5 NODE_1_length_838597_cov_18.7136, whole genome shotgun sequence

⇒Summary: seq-len = 838597 bp; # of CRISPR array = 3; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 239542-239702 bp]: array | spacers
           [Locus range 483386-483941 bp]: array | spacers
           [Locus range 837499-837594 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SERN01000004.1 Clostridioides difficile strain LC5-008-5 NODE_4_length_277525_cov_19.762, whole genome shotgun sequence

⇒Summary: seq-len = 277525 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 190361-191375 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SERN01000017.1 Clostridioides difficile strain LC5-008-5 NODE_17_length_62358_cov_16.916, whole genome shotgun sequence

⇒Summary: seq-len = 62358 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 56753-58359 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SERN01000015.1 Clostridioides difficile strain LC5-008-5 NODE_15_length_99762_cov_17.6562, whole genome shotgun sequence

⇒Summary: seq-len = 99762 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18557-19045 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SERN01000009.1 Clostridioides difficile strain LC5-008-5 NODE_9_length_203294_cov_18.3456, whole genome shotgun sequence

⇒Summary: seq-len = 203294 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91057-91945 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SERN01000002.1 Clostridioides difficile strain LC5-008-5 NODE_2_length_422963_cov_20.7295, whole genome shotgun sequence

⇒Summary: seq-len = 422963 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 256300-257772 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SERN01000021.1 Clostridioides difficile strain LC5-008-5 NODE_21_length_11527_cov_18.9842, whole genome shotgun sequence

⇒Summary: seq-len = 11527 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2650-2877 bp]: array | spacers
           [Locus range 5544-5705 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)