CRISPRone

CRISPRone report for GCA_007000415.1_ASM700041v1

♦ Seq 1: SERK01000010.1 Clostridioides difficile strain LC5-008-2 NODE_10_length_181327_cov_22.5756, whole genome shotgun sequence

⇒Summary: seq-len = 181327 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 89102-89991 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SERK01000002.1 Clostridioides difficile strain LC5-008-2 NODE_2_length_423027_cov_27.023, whole genome shotgun sequence

⇒Summary: seq-len = 423027 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 256364-257836 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SERK01000024.1 Clostridioides difficile strain LC5-008-2 NODE_24_length_11527_cov_63.9101, whole genome shotgun sequence

⇒Summary: seq-len = 11527 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2650-2877 bp]: array | spacers
           [Locus range 5544-5705 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SERK01000004.1 Clostridioides difficile strain LC5-008-2 NODE_4_length_277624_cov_29.6861, whole genome shotgun sequence

⇒Summary: seq-len = 277624 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 190341-191355 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SERK01000015.1 Clostridioides difficile strain LC5-008-2 NODE_15_length_99520_cov_23.3319, whole genome shotgun sequence

⇒Summary: seq-len = 99520 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18315-18803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SERK01000001.1 Clostridioides difficile strain LC5-008-2 NODE_1_length_767587_cov_28.0268, whole genome shotgun sequence

⇒Summary: seq-len = 767587 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 239865-240025 bp]: array | spacers
           [Locus range 483709-484264 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SERK01000018.1 Clostridioides difficile strain LC5-008-2 NODE_18_length_37397_cov_18.6069, whole genome shotgun sequence

⇒Summary: seq-len = 37397 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4769-6376 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SERK01000003.1 Clostridioides difficile strain LC5-008-2 NODE_3_length_306481_cov_28.6179, whole genome shotgun sequence

⇒Summary: seq-len = 306481 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 235912-236006 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)