CRISPRone

CRISPRone report for GCA_007000435.1_ASM700043v1

♦ Seq 1: SERL01000004.1 Clostridioides difficile strain LC5-008-3 NODE_4_length_277806_cov_26.5693, whole genome shotgun sequence

⇒Summary: seq-len = 277806 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 86433-87446 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SERL01000022.1 Clostridioides difficile strain LC5-008-3 NODE_22_length_11527_cov_24.5875, whole genome shotgun sequence

⇒Summary: seq-len = 11527 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2650-2877 bp]: array | spacers
           [Locus range 5544-5705 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SERL01000002.1 Clostridioides difficile strain LC5-008-3 NODE_2_length_422963_cov_27.9896, whole genome shotgun sequence

⇒Summary: seq-len = 422963 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 256300-257772 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SERL01000001.1 Clostridioides difficile strain LC5-008-3 NODE_1_length_1089820_cov_24.0531, whole genome shotgun sequence

⇒Summary: seq-len = 1089820 bp; # of CRISPR array = 3; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 239542-239702 bp]: array | spacers
           [Locus range 483386-483941 bp]: array | spacers
           [Locus range 837499-837594 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SERL01000014.1 Clostridioides difficile strain LC5-008-3 NODE_14_length_99520_cov_22.9674, whole genome shotgun sequence

⇒Summary: seq-len = 99520 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18315-18803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SERL01000007.1 Clostridioides difficile strain LC5-008-3 NODE_7_length_203360_cov_24.6606, whole genome shotgun sequence

⇒Summary: seq-len = 203360 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 91057-91945 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SERL01000017.1 Clostridioides difficile strain LC5-008-3 NODE_17_length_62418_cov_22.2794, whole genome shotgun sequence

⇒Summary: seq-len = 62418 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 56753-58359 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)