CRISPRone

CRISPRone report for GCA_007000475.1_ASM700047v1

♦ Seq 1: SERJ01000022.1 Clostridioides difficile strain LC5-008-1 NODE_22_length_11527_cov_26.6979, whole genome shotgun sequence

⇒Summary: seq-len = 11527 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2650-2877 bp]: array | spacers
           [Locus range 5544-5705 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SERJ01000001.1 Clostridioides difficile strain LC5-008-1 NODE_1_length_735252_cov_22.2793, whole genome shotgun sequence

⇒Summary: seq-len = 735252 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 240009-240169 bp]: array | spacers
           [Locus range 483853-484408 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SERJ01000003.1 Clostridioides difficile strain LC5-008-1 NODE_3_length_354910_cov_20.2962, whole genome shotgun sequence

⇒Summary: seq-len = 354910 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 102589-102684 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SERJ01000017.1 Clostridioides difficile strain LC5-008-1 NODE_17_length_62559_cov_19.4683, whole genome shotgun sequence

⇒Summary: seq-len = 62559 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 56720-58326 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SERJ01000005.1 Clostridioides difficile strain LC5-008-1 NODE_5_length_277758_cov_23.2916, whole genome shotgun sequence

⇒Summary: seq-len = 277758 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 190640-191654 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SERJ01000002.1 Clostridioides difficile strain LC5-008-1 NODE_2_length_422963_cov_23.3254, whole genome shotgun sequence

⇒Summary: seq-len = 422963 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 256300-257772 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SERJ01000014.1 Clostridioides difficile strain LC5-008-1 NODE_14_length_99629_cov_20.1392, whole genome shotgun sequence

⇒Summary: seq-len = 99629 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18424-18912 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SERJ01000009.1 Clostridioides difficile strain LC5-008-1 NODE_9_length_203773_cov_20.5857, whole genome shotgun sequence

⇒Summary: seq-len = 203773 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 111482-112371 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)