CRISPRone

CRISPRone report for GCA_007000505.1_ASM700050v1

♦ Seq 1: SERI01000001.1 Clostridioides difficile strain LC4-013-8 NODE_1_length_314510_cov_43.059, whole genome shotgun sequence

⇒Summary: seq-len = 314510 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 62105-63058 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SERI01000047.1 Clostridioides difficile strain LC4-013-8 NODE_47_length_15908_cov_51.2825, whole genome shotgun sequence

⇒Summary: seq-len = 15908 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 332-1303 bp]: array | spacers
           [Locus range 2955-3247 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SERI01000003.1 Clostridioides difficile strain LC4-013-8 NODE_3_length_211330_cov_44.8448, whole genome shotgun sequence

⇒Summary: seq-len = 211330 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 29948-30304 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SERI01000045.1 Clostridioides difficile strain LC4-013-8 NODE_45_length_16584_cov_35.136, whole genome shotgun sequence

⇒Summary: seq-len = 16584 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10083-11357 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SERI01000005.1 Clostridioides difficile strain LC4-013-8 NODE_5_length_177255_cov_42.232, whole genome shotgun sequence

⇒Summary: seq-len = 177255 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 79835-80262 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SERI01000013.1 Clostridioides difficile strain LC4-013-8 NODE_13_length_88839_cov_41.6251, whole genome shotgun sequence

⇒Summary: seq-len = 88839 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 34627-35775 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SERI01000023.1 Clostridioides difficile strain LC4-013-8 NODE_23_length_63447_cov_40.0061, whole genome shotgun sequence

⇒Summary: seq-len = 63447 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45158-45649 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)