CRISPRone

CRISPRone report for GCA_007000515.1_ASM700051v1

♦ Seq 1: SERH01000072.1 Clostridioides difficile strain LC4-013-7 NODE_72_length_7425_cov_32.7003, whole genome shotgun sequence

⇒Summary: seq-len = 7425 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2947-3900 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SERH01000011.1 Clostridioides difficile strain LC4-013-7 NODE_11_length_94334_cov_37.3393, whole genome shotgun sequence

⇒Summary: seq-len = 94334 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 52319-52746 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SERH01000016.1 Clostridioides difficile strain LC4-013-7 NODE_16_length_85092_cov_36.7493, whole genome shotgun sequence

⇒Summary: seq-len = 85092 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 31018-32166 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SERH01000003.1 Clostridioides difficile strain LC4-013-7 NODE_3_length_235769_cov_39.8171, whole genome shotgun sequence

⇒Summary: seq-len = 235769 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SERH01000098.1 Clostridioides difficile strain LC4-013-7 NODE_98_length_4070_cov_36.279, whole genome shotgun sequence

⇒Summary: seq-len = 4070 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3504-3860 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SERH01000038.1 Clostridioides difficile strain LC4-013-7 NODE_38_length_28442_cov_33.9201, whole genome shotgun sequence

⇒Summary: seq-len = 28442 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10153-10644 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SERH01000037.1 Clostridioides difficile strain LC4-013-7 NODE_37_length_28762_cov_33.6199, whole genome shotgun sequence

⇒Summary: seq-len = 28762 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13371-14644 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: SERH01000006.1 Clostridioides difficile strain LC4-013-7 NODE_6_length_170700_cov_39.3654, whole genome shotgun sequence

⇒Summary: seq-len = 170700 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 122983-123274 bp]: array | spacers
           [Locus range 124927-125897 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)