CRISPRone

CRISPRone report for GCA_007000555.1_ASM700055v1

♦ Seq 1: SERF01000008.1 Clostridioides difficile strain LC4-013-5 NODE_8_length_174284_cov_41.3669, whole genome shotgun sequence

⇒Summary: seq-len = 174284 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 115263-115554 bp]: array | spacers
           [Locus range 117207-118177 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: SERF01000022.1 Clostridioides difficile strain LC4-013-5 NODE_22_length_50357_cov_37.8337, whole genome shotgun sequence

⇒Summary: seq-len = 50357 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 35083-36357 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: SERF01000001.1 Clostridioides difficile strain LC4-013-5 NODE_1_length_385250_cov_45.1113, whole genome shotgun sequence

⇒Summary: seq-len = 385250 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 235488-235844 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: SERF01000003.1 Clostridioides difficile strain LC4-013-5 NODE_3_length_260907_cov_41.075, whole genome shotgun sequence

⇒Summary: seq-len = 260907 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 251454-252406 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: SERF01000034.1 Clostridioides difficile strain LC4-013-5 NODE_34_length_31387_cov_38.1553, whole genome shotgun sequence

⇒Summary: seq-len = 31387 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6550-7697 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: SERF01000026.1 Clostridioides difficile strain LC4-013-5 NODE_26_length_40567_cov_38.0662, whole genome shotgun sequence

⇒Summary: seq-len = 40567 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 22278-22769 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: SERF01000012.1 Clostridioides difficile strain LC4-013-5 NODE_12_length_112959_cov_40.1113, whole genome shotgun sequence

⇒Summary: seq-len = 112959 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53286-53713 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)