CRISPRone

CRISPRone report for GCA_007000615.1_ASM700061v1

♦ Seq 1: QWUB01000544.1 Clostridioides difficile strain LC1-8-1014 NODE_544_length_2351_cov_1.74101, whole genome shotgun sequence

⇒Summary: seq-len = 2351 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 647-1789 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUB01000646.1 Clostridioides difficile strain LC1-8-1014 NODE_646_length_1807_cov_2.4119, whole genome shotgun sequence

⇒Summary: seq-len = 1807 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1252-1808 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUB01000098.1 Clostridioides difficile strain LC1-8-1014 NODE_98_length_8679_cov_3.90306, whole genome shotgun sequence

⇒Summary: seq-len = 8679 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2691-3117 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUB01000192.1 Clostridioides difficile strain LC1-8-1014 NODE_192_length_6020_cov_3.15612, whole genome shotgun sequence

⇒Summary: seq-len = 6020 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 319-545 bp]: array | spacers
           [Locus range 1147-1967 bp]: array | spacers
           [Locus range 5429-5654 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUB01000667.1 Clostridioides difficile strain LC1-8-1014 NODE_667_length_1683_cov_2.01799, whole genome shotgun sequence

⇒Summary: seq-len = 1683 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUB01000546.1 Clostridioides difficile strain LC1-8-1014 NODE_546_length_2338_cov_3.66305, whole genome shotgun sequence

⇒Summary: seq-len = 2338 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUB01000311.1 Clostridioides difficile strain LC1-8-1014 NODE_311_length_4612_cov_5.36165, whole genome shotgun sequence

⇒Summary: seq-len = 4612 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3833-4057 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUB01000599.1 Clostridioides difficile strain LC1-8-1014 NODE_599_length_2023_cov_1.92932, whole genome shotgun sequence

⇒Summary: seq-len = 2023 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 48-1589 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUB01000061.1 Clostridioides difficile strain LC1-8-1014 NODE_61_length_10812_cov_2.79832, whole genome shotgun sequence

⇒Summary: seq-len = 10812 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4443-4870 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)