CRISPRone

CRISPRone report for GCA_007000655.1_ASM700065v1

♦ Seq 1: QWUF01000030.1 Clostridioides difficile strain LC1-4-0617 NODE_30_length_30683_cov_4.98943, whole genome shotgun sequence

⇒Summary: seq-len = 30683 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 578-1002 bp]: array | spacers
           [Locus range 2606-2830 bp]: array | spacers
           [Locus range 4623-5509 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUF01000104.1 Clostridioides difficile strain LC1-4-0617 NODE_104_length_13331_cov_3.54287, whole genome shotgun sequence

⇒Summary: seq-len = 13331 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 9703-11303 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUF01000004.1 Clostridioides difficile strain LC1-4-0617 NODE_4_length_60464_cov_4.31241, whole genome shotgun sequence

⇒Summary: seq-len = 60464 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59475-59837 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUF01000203.1 Clostridioides difficile strain LC1-4-0617 NODE_203_length_5685_cov_3.07899, whole genome shotgun sequence

⇒Summary: seq-len = 5685 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3558-4577 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUF01000057.1 Clostridioides difficile strain LC1-4-0617 NODE_57_length_22088_cov_4.56732, whole genome shotgun sequence

⇒Summary: seq-len = 22088 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13278-13372 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUF01000001.1 Clostridioides difficile strain LC1-4-0617 NODE_1_length_78740_cov_5.08047, whole genome shotgun sequence

⇒Summary: seq-len = 78740 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 63047-63533 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUF01000066.1 Clostridioides difficile strain LC1-4-0617 NODE_66_length_20457_cov_4.02361, whole genome shotgun sequence

⇒Summary: seq-len = 20457 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3634-4251 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUF01000009.1 Clostridioides difficile strain LC1-4-0617 NODE_9_length_48664_cov_4.84459, whole genome shotgun sequence

⇒Summary: seq-len = 48664 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4039-4396 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUF01000263.1 Clostridioides difficile strain LC1-4-0617 NODE_263_length_2674_cov_3.80408, whole genome shotgun sequence

⇒Summary: seq-len = 2674 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 760-921 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUF01000328.1 Clostridioides difficile strain LC1-4-0617 NODE_328_length_762_cov_3.28819, whole genome shotgun sequence

⇒Summary: seq-len = 762 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38-329 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUF01000044.1 Clostridioides difficile strain LC1-4-0617 NODE_44_length_26074_cov_4.93757, whole genome shotgun sequence

⇒Summary: seq-len = 26074 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWUF01000237.1 Clostridioides difficile strain LC1-4-0617 NODE_237_length_4015_cov_3.45602, whole genome shotgun sequence

⇒Summary: seq-len = 4015 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 458-1607 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: QWUF01000134.1 Clostridioides difficile strain LC1-4-0617 NODE_134_length_10405_cov_4.1763, whole genome shotgun sequence

⇒Summary: seq-len = 10405 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10202-10363 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)