CRISPRone

CRISPRone report for GCA_007000675.1_ASM700067v1

♦ Seq 1: QWUD01000002.1 Clostridioides difficile strain LC1-6-0302 NODE_2_length_174838_cov_13.6953, whole genome shotgun sequence

⇒Summary: seq-len = 174838 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUD01000025.1 Clostridioides difficile strain LC1-6-0302 NODE_25_length_54842_cov_11.2374, whole genome shotgun sequence

⇒Summary: seq-len = 54842 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4780-5006 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUD01000078.1 Clostridioides difficile strain LC1-6-0302 NODE_78_length_10137_cov_12.2477, whole genome shotgun sequence

⇒Summary: seq-len = 10137 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5194-6011 bp]: array | spacers
           [Locus range 6614-7101 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUD01000019.1 Clostridioides difficile strain LC1-6-0302 NODE_19_length_61942_cov_13.2149, whole genome shotgun sequence

⇒Summary: seq-len = 61942 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59485-59912 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUD01000011.1 Clostridioides difficile strain LC1-6-0302 NODE_11_length_82285_cov_13.4935, whole genome shotgun sequence

⇒Summary: seq-len = 82285 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 67093-67186 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUD01000109.1 Clostridioides difficile strain LC1-6-0302 NODE_109_length_4274_cov_5.46974, whole genome shotgun sequence

⇒Summary: seq-len = 4274 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2016-2242 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUD01000044.1 Clostridioides difficile strain LC1-6-0302 NODE_44_length_35026_cov_11.5965, whole genome shotgun sequence

⇒Summary: seq-len = 35026 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 251-807 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUD01000030.1 Clostridioides difficile strain LC1-6-0302 NODE_30_length_48749_cov_10.3439, whole genome shotgun sequence

⇒Summary: seq-len = 48749 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24313-25071 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUD01000110.1 Clostridioides difficile strain LC1-6-0302 NODE_110_length_4096_cov_8.05291, whole genome shotgun sequence

⇒Summary: seq-len = 4096 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 110-1849 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUD01000018.1 Clostridioides difficile strain LC1-6-0302 NODE_18_length_62425_cov_11.558, whole genome shotgun sequence

⇒Summary: seq-len = 62425 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 42657-43014 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)