CRISPRone

CRISPRone report for GCA_007000725.1_ASM700072v1

♦ Seq 1: QWUG01000017.1 Clostridioides difficile strain LC1-4-0303 NODE_17_length_56005_cov_10.3341, whole genome shotgun sequence

⇒Summary: seq-len = 56005 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 43212-44100 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUG01000175.1 Clostridioides difficile strain LC1-4-0303 NODE_175_length_3594_cov_6.43554, whole genome shotgun sequence

⇒Summary: seq-len = 3594 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1453-1615 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUG01000060.1 Clostridioides difficile strain LC1-4-0303 NODE_60_length_23851_cov_11.2661, whole genome shotgun sequence

⇒Summary: seq-len = 23851 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4712-5206 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUG01000050.1 Clostridioides difficile strain LC1-4-0303 NODE_50_length_27624_cov_9.69524, whole genome shotgun sequence

⇒Summary: seq-len = 27624 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 9634-11374 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUG01000021.1 Clostridioides difficile strain LC1-4-0303 NODE_21_length_50579_cov_12.2673, whole genome shotgun sequence

⇒Summary: seq-len = 50579 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45695-46652 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUG01000107.1 Clostridioides difficile strain LC1-4-0303 NODE_107_length_12679_cov_10.5361, whole genome shotgun sequence

⇒Summary: seq-len = 12679 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUG01000151.1 Clostridioides difficile strain LC1-4-0303 NODE_151_length_5576_cov_9.39457, whole genome shotgun sequence

⇒Summary: seq-len = 5576 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4723-5478 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUG01000004.1 Clostridioides difficile strain LC1-4-0303 NODE_4_length_83608_cov_11.5292, whole genome shotgun sequence

⇒Summary: seq-len = 83608 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 76297-77511 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUG01000045.1 Clostridioides difficile strain LC1-4-0303 NODE_45_length_29755_cov_12.1605, whole genome shotgun sequence

⇒Summary: seq-len = 29755 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3061-3488 bp]: array | spacers
           [Locus range 4091-4515 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)