CRISPRone

CRISPRone report for GCA_007000735.1_ASM700073v1

♦ Seq 1: QWUH01000013.1 Clostridioides difficile strain LC1-39-0613 NODE_13_length_93680_cov_12.2431, whole genome shotgun sequence

⇒Summary: seq-len = 93680 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 48415-48842 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUH01000030.1 Clostridioides difficile strain LC1-39-0613 NODE_30_length_48839_cov_12.064, whole genome shotgun sequence

⇒Summary: seq-len = 48839 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3150-3642 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUH01000001.1 Clostridioides difficile strain LC1-39-0613 NODE_1_length_240166_cov_14.5177, whole genome shotgun sequence

⇒Summary: seq-len = 240166 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 235603-235959 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUH01000037.1 Clostridioides difficile strain LC1-39-0613 NODE_37_length_39917_cov_11.7536, whole genome shotgun sequence

⇒Summary: seq-len = 39917 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 35443-36395 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUH01000002.1 Clostridioides difficile strain LC1-39-0613 NODE_2_length_231011_cov_14.705, whole genome shotgun sequence

⇒Summary: seq-len = 231011 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUH01000044.1 Clostridioides difficile strain LC1-39-0613 NODE_44_length_34680_cov_11.1509, whole genome shotgun sequence

⇒Summary: seq-len = 34680 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 14052-15258 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUH01000012.1 Clostridioides difficile strain LC1-39-0613 NODE_12_length_101584_cov_18.8706, whole genome shotgun sequence

⇒Summary: seq-len = 101584 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 56974-58711 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUH01000115.1 Clostridioides difficile strain LC1-39-0613 NODE_115_length_604_cov_6.91614, whole genome shotgun sequence

⇒Summary: seq-len = 604 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 312-473 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUH01000059.1 Clostridioides difficile strain LC1-39-0613 NODE_59_length_14824_cov_16.338, whole genome shotgun sequence

⇒Summary: seq-len = 14824 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3025-3251 bp]: array | spacers
           [Locus range 3853-4344 bp]: array | spacers
           [Locus range 7740-7965 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)