CRISPRone

CRISPRone report for GCA_007000755.1_ASM700075v1

♦ Seq 1: QWUJ01000394.1 Clostridioides difficile strain LC1-32-0523 NODE_394_length_2107_cov_5.23131, whole genome shotgun sequence

⇒Summary: seq-len = 2107 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 241-1390 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUJ01000327.1 Clostridioides difficile strain LC1-32-0523 NODE_327_length_3376_cov_5.00185, whole genome shotgun sequence

⇒Summary: seq-len = 3376 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 872-1358 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUJ01000068.1 Clostridioides difficile strain LC1-32-0523 NODE_68_length_15826_cov_4.24174, whole genome shotgun sequence

⇒Summary: seq-len = 15826 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 11765-12381 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUJ01000325.1 Clostridioides difficile strain LC1-32-0523 NODE_325_length_3408_cov_4.08656, whole genome shotgun sequence

⇒Summary: seq-len = 3408 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2852-3343 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUJ01000149.1 Clostridioides difficile strain LC1-32-0523 NODE_149_length_9405_cov_3.75631, whole genome shotgun sequence

⇒Summary: seq-len = 9405 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUJ01000043.1 Clostridioides difficile strain LC1-32-0523 NODE_43_length_20463_cov_7.2619, whole genome shotgun sequence

⇒Summary: seq-len = 20463 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 363-787 bp]: array | spacers
           [Locus range 2391-2615 bp]: array | spacers
           [Locus range 4408-5294 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUJ01000066.1 Clostridioides difficile strain LC1-32-0523 NODE_66_length_16315_cov_6.04207, whole genome shotgun sequence

⇒Summary: seq-len = 16315 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8470-8563 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUJ01000262.1 Clostridioides difficile strain LC1-32-0523 NODE_262_length_4968_cov_6.15369, whole genome shotgun sequence

⇒Summary: seq-len = 4968 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3992-4349 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUJ01000275.1 Clostridioides difficile strain LC1-32-0523 NODE_275_length_4591_cov_3.13844, whole genome shotgun sequence

⇒Summary: seq-len = 4591 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3522-4541 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUJ01000400.1 Clostridioides difficile strain LC1-32-0523 NODE_400_length_2014_cov_3.33174, whole genome shotgun sequence

⇒Summary: seq-len = 2014 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 908-1983 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUJ01000433.1 Clostridioides difficile strain LC1-32-0523 NODE_433_length_1500_cov_5.41078, whole genome shotgun sequence

⇒Summary: seq-len = 1500 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 260-421 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWUJ01000151.1 Clostridioides difficile strain LC1-32-0523 NODE_151_length_9219_cov_3.51507, whole genome shotgun sequence

⇒Summary: seq-len = 9219 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 0-412 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: QWUJ01000269.1 Clostridioides difficile strain LC1-32-0523 NODE_269_length_4777_cov_3.76796, whole genome shotgun sequence

⇒Summary: seq-len = 4777 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2099-2462 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)