CRISPRone

CRISPRone report for GCA_007000785.1_ASM700078v1

♦ Seq 1: QWUK01000101.1 Clostridioides difficile strain LC1-31-0201 NODE_101_length_8627_cov_5.82894, whole genome shotgun sequence

⇒Summary: seq-len = 8627 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 33-192 bp]: array | spacers
           [Locus range 1992-2216 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUK01000407.1 Clostridioides difficile strain LC1-31-0201 NODE_407_length_3364_cov_2.41087, whole genome shotgun sequence

⇒Summary: seq-len = 3364 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 474-1623 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUK01000374.1 Clostridioides difficile strain LC1-31-0201 NODE_374_length_3664_cov_2.54198, whole genome shotgun sequence

⇒Summary: seq-len = 3664 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 442-1198 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUK01000215.1 Clostridioides difficile strain LC1-31-0201 NODE_215_length_5586_cov_2.07529, whole genome shotgun sequence

⇒Summary: seq-len = 5586 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 0-422 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUK01000749.1 Clostridioides difficile strain LC1-31-0201 NODE_749_length_1498_cov_3.08169, whole genome shotgun sequence

⇒Summary: seq-len = 1498 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 930-1288 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUK01000042.1 Clostridioides difficile strain LC1-31-0201 NODE_42_length_12117_cov_7.72777, whole genome shotgun sequence

⇒Summary: seq-len = 12117 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6328-6488 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUK01000597.1 Clostridioides difficile strain LC1-31-0201 NODE_597_length_2188_cov_2.50849, whole genome shotgun sequence

⇒Summary: seq-len = 2188 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUK01000565.1 Clostridioides difficile strain LC1-31-0201 NODE_565_length_2401_cov_2.71812, whole genome shotgun sequence

⇒Summary: seq-len = 2401 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 306-467 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUK01000063.1 Clostridioides difficile strain LC1-31-0201 NODE_63_length_10476_cov_3.49116, whole genome shotgun sequence

⇒Summary: seq-len = 10476 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUK01000887.1 Clostridioides difficile strain LC1-31-0201 NODE_887_length_1114_cov_3.92503, whole genome shotgun sequence

⇒Summary: seq-len = 1114 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-944 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUK01000431.1 Clostridioides difficile strain LC1-31-0201 NODE_431_length_3183_cov_2.71237, whole genome shotgun sequence

⇒Summary: seq-len = 3183 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 421-914 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWUK01000415.1 Clostridioides difficile strain LC1-31-0201 NODE_415_length_3299_cov_3.96564, whole genome shotgun sequence

⇒Summary: seq-len = 3299 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1163-1780 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: QWUK01000593.1 Clostridioides difficile strain LC1-31-0201 NODE_593_length_2233_cov_2.43827, whole genome shotgun sequence

⇒Summary: seq-len = 2233 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-881 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)