CRISPRone

CRISPRone report for GCA_007000795.1_ASM700079v1

♦ Seq 1: QWUL01000002.1 Clostridioides difficile strain LC1-30-0313 NODE_2_length_127895_cov_10.6137, whole genome shotgun sequence

⇒Summary: seq-len = 127895 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 7345-9015 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUL01000093.1 Clostridioides difficile strain LC1-30-0313 NODE_93_length_8998_cov_5.95265, whole genome shotgun sequence

⇒Summary: seq-len = 8998 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8388-8746 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUL01000111.1 Clostridioides difficile strain LC1-30-0313 NODE_111_length_3897_cov_5.01088, whole genome shotgun sequence

⇒Summary: seq-len = 3897 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 677-1892 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUL01000025.1 Clostridioides difficile strain LC1-30-0313 NODE_25_length_59738_cov_7.49917, whole genome shotgun sequence

⇒Summary: seq-len = 59738 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 57723-57882 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUL01000023.1 Clostridioides difficile strain LC1-30-0313 NODE_23_length_61704_cov_8.26302, whole genome shotgun sequence

⇒Summary: seq-len = 61704 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1946-2241 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUL01000019.1 Clostridioides difficile strain LC1-30-0313 NODE_19_length_67071_cov_9.40399, whole genome shotgun sequence

⇒Summary: seq-len = 67071 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 49064-50470 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUL01000004.1 Clostridioides difficile strain LC1-30-0313 NODE_4_length_119971_cov_11.347, whole genome shotgun sequence

⇒Summary: seq-len = 119971 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 109430-109987 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUL01000094.1 Clostridioides difficile strain LC1-30-0313 NODE_94_length_8529_cov_7.40014, whole genome shotgun sequence

⇒Summary: seq-len = 8529 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4722-5606 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUL01000078.1 Clostridioides difficile strain LC1-30-0313 NODE_78_length_12671_cov_8.31688, whole genome shotgun sequence

⇒Summary: seq-len = 12671 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5427-6516 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)