CRISPRone

CRISPRone report for GCA_007000825.1_ASM700082v1

♦ Seq 1: QWUM01000401.1 Clostridioides difficile strain LC1-29-0405 NODE_401_length_2917_cov_3.4276, whole genome shotgun sequence

⇒Summary: seq-len = 2917 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 862-2928 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUM01000057.1 Clostridioides difficile strain LC1-29-0405 NODE_57_length_14581_cov_6.44507, whole genome shotgun sequence

⇒Summary: seq-len = 14581 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10096-10792 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUM01000138.1 Clostridioides difficile strain LC1-29-0405 NODE_138_length_9616_cov_8.60133, whole genome shotgun sequence

⇒Summary: seq-len = 9616 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4741-5011 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUM01000652.1 Clostridioides difficile strain LC1-29-0405 NODE_652_length_680_cov_1.57685, whole genome shotgun sequence

⇒Summary: seq-len = 680 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-552 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUM01000309.1 Clostridioides difficile strain LC1-29-0405 NODE_309_length_4507_cov_3.91507, whole genome shotgun sequence

⇒Summary: seq-len = 4507 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2631-3118 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUM01000227.1 Clostridioides difficile strain LC1-29-0405 NODE_227_length_6123_cov_4.39326, whole genome shotgun sequence

⇒Summary: seq-len = 6123 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-884 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUM01000041.1 Clostridioides difficile strain LC1-29-0405 NODE_41_length_16787_cov_4.53842, whole genome shotgun sequence

⇒Summary: seq-len = 16787 bp; # of CRISPR array = 0; # of cas gene = 7  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUM01000372.1 Clostridioides difficile strain LC1-29-0405 NODE_372_length_3302_cov_4.11433, whole genome shotgun sequence

⇒Summary: seq-len = 3302 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 79-305 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUM01000001.1 Clostridioides difficile strain LC1-29-0405 NODE_1_length_47007_cov_19.5148, whole genome shotgun sequence

⇒Summary: seq-len = 47007 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 381-1731 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUM01000412.1 Clostridioides difficile strain LC1-29-0405 NODE_412_length_2736_cov_3.30011, whole genome shotgun sequence

⇒Summary: seq-len = 2736 bp; # of CRISPR array = 1; # of cas gene = 3  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 2098-2723 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUM01000007.1 Clostridioides difficile strain LC1-29-0405 NODE_7_length_34508_cov_6.74396, whole genome shotgun sequence

⇒Summary: seq-len = 34508 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWUM01000108.1 Clostridioides difficile strain LC1-29-0405 NODE_108_length_10721_cov_4.57476, whole genome shotgun sequence

⇒Summary: seq-len = 10721 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9991-10417 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: QWUM01000533.1 Clostridioides difficile strain LC1-29-0405 NODE_533_length_1462_cov_3.27865, whole genome shotgun sequence

⇒Summary: seq-len = 1462 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 356-514 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)