CRISPRone

CRISPRone report for GCA_007000885.1_ASM700088v1

♦ Seq 1: QWUO01000039.1 Clostridioides difficile strain LC1-27-1019 NODE_39_length_35888_cov_16.273, whole genome shotgun sequence

⇒Summary: seq-len = 35888 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3601-4751 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUO01000052.1 Clostridioides difficile strain LC1-27-1019 NODE_52_length_22027_cov_17.0684, whole genome shotgun sequence

⇒Summary: seq-len = 22027 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1962-2122 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUO01000005.1 Clostridioides difficile strain LC1-27-1019 NODE_5_length_155891_cov_22.8568, whole genome shotgun sequence

⇒Summary: seq-len = 155891 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 102385-102743 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUO01000044.1 Clostridioides difficile strain LC1-27-1019 NODE_44_length_31198_cov_18.7076, whole genome shotgun sequence

⇒Summary: seq-len = 31198 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24845-25338 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUO01000036.1 Clostridioides difficile strain LC1-27-1019 NODE_36_length_40419_cov_24.849, whole genome shotgun sequence

⇒Summary: seq-len = 40419 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUO01000062.1 Clostridioides difficile strain LC1-27-1019 NODE_62_length_7867_cov_30.9795, whole genome shotgun sequence

⇒Summary: seq-len = 7867 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4856-5147 bp]: array | spacers
           [Locus range 6800-7770 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUO01000001.1 Clostridioides difficile strain LC1-27-1019 NODE_1_length_331866_cov_25.729, whole genome shotgun sequence

⇒Summary: seq-len = 331866 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 84686-86285 bp]: array | spacers
           [Locus range 318229-318322 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUO01000035.1 Clostridioides difficile strain LC1-27-1019 NODE_35_length_44504_cov_19.0548, whole genome shotgun sequence

⇒Summary: seq-len = 44504 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 40368-40984 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUO01000059.1 Clostridioides difficile strain LC1-27-1019 NODE_59_length_9676_cov_26.9093, whole genome shotgun sequence

⇒Summary: seq-len = 9676 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4649-5534 bp]: array | spacers
           [Locus range 7328-7551 bp]: array | spacers
           [Locus range 9156-9579 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUO01000002.1 Clostridioides difficile strain LC1-27-1019 NODE_2_length_234577_cov_23.8352, whole genome shotgun sequence

⇒Summary: seq-len = 234577 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 147337-148486 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUO01000020.1 Clostridioides difficile strain LC1-27-1019 NODE_20_length_64164_cov_19.0091, whole genome shotgun sequence

⇒Summary: seq-len = 64164 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18472-18963 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)