CRISPRone

CRISPRone report for GCA_007000895.1_ASM700089v1

♦ Seq 1: QWUP01000042.1 Clostridioides difficile strain LC1-25-0330 NODE_42_length_19872_cov_9.31416, whole genome shotgun sequence

⇒Summary: seq-len = 19872 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2578-2803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUP01000496.1 Clostridioides difficile strain LC1-25-0330 NODE_496_length_1447_cov_3.28864, whole genome shotgun sequence

⇒Summary: seq-len = 1447 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUP01000127.1 Clostridioides difficile strain LC1-25-0330 NODE_127_length_9764_cov_3.62094, whole genome shotgun sequence

⇒Summary: seq-len = 9764 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 7291-7840 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUP01000289.1 Clostridioides difficile strain LC1-25-0330 NODE_289_length_4586_cov_4.89751, whole genome shotgun sequence

⇒Summary: seq-len = 4586 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2401-2822 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUP01000131.1 Clostridioides difficile strain LC1-25-0330 NODE_131_length_9555_cov_7.79052, whole genome shotgun sequence

⇒Summary: seq-len = 9555 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 599-759 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUP01000337.1 Clostridioides difficile strain LC1-25-0330 NODE_337_length_3563_cov_3.9578, whole genome shotgun sequence

⇒Summary: seq-len = 3563 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2327-3539 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUP01000148.1 Clostridioides difficile strain LC1-25-0330 NODE_148_length_8704_cov_3.39618, whole genome shotgun sequence

⇒Summary: seq-len = 8704 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1952-2836 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUP01000113.1 Clostridioides difficile strain LC1-25-0330 NODE_113_length_10663_cov_7.49601, whole genome shotgun sequence

⇒Summary: seq-len = 10663 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 86-581 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUP01000027.1 Clostridioides difficile strain LC1-25-0330 NODE_27_length_24180_cov_6.34561, whole genome shotgun sequence

⇒Summary: seq-len = 24180 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUP01000140.1 Clostridioides difficile strain LC1-25-0330 NODE_140_length_9070_cov_5.24667, whole genome shotgun sequence

⇒Summary: seq-len = 9070 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5735-6226 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUP01000061.1 Clostridioides difficile strain LC1-25-0330 NODE_61_length_17140_cov_13.3096, whole genome shotgun sequence

⇒Summary: seq-len = 17140 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 69-362 bp]: array | spacers
           [Locus range 2709-2802 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)