CRISPRone

CRISPRone report for GCA_007000915.1_ASM700091v1

♦ Seq 1: QWUQ01000056.1 Clostridioides difficile strain LC1-24-1110 NODE_56_length_8672_cov_29.0722, whole genome shotgun sequence

⇒Summary: seq-len = 8672 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7679-8496 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUQ01000031.1 Clostridioides difficile strain LC1-24-1110 NODE_31_length_45646_cov_16.7248, whole genome shotgun sequence

⇒Summary: seq-len = 45646 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 25091-26830 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUQ01000009.1 Clostridioides difficile strain LC1-24-1110 NODE_9_length_143353_cov_23.838, whole genome shotgun sequence

⇒Summary: seq-len = 143353 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUQ01000105.1 Clostridioides difficile strain LC1-24-1110 NODE_105_length_591_cov_23.528, whole genome shotgun sequence

⇒Summary: seq-len = 591 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 268-494 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUQ01000001.1 Clostridioides difficile strain LC1-24-1110 NODE_1_length_467688_cov_27.7302, whole genome shotgun sequence

⇒Summary: seq-len = 467688 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 287261-287355 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUQ01000093.1 Clostridioides difficile strain LC1-24-1110 NODE_93_length_920_cov_24.4893, whole genome shotgun sequence

⇒Summary: seq-len = 920 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 268-823 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUQ01000017.1 Clostridioides difficile strain LC1-24-1110 NODE_17_length_83850_cov_19.7768, whole genome shotgun sequence

⇒Summary: seq-len = 83850 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23499-24258 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUQ01000048.1 Clostridioides difficile strain LC1-24-1110 NODE_48_length_15265_cov_19.9658, whole genome shotgun sequence

⇒Summary: seq-len = 15265 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10432-10859 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUQ01000012.1 Clostridioides difficile strain LC1-24-1110 NODE_12_length_115848_cov_20.8947, whole genome shotgun sequence

⇒Summary: seq-len = 115848 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 92848-93269 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUQ01000025.1 Clostridioides difficile strain LC1-24-1110 NODE_25_length_67087_cov_18.8739, whole genome shotgun sequence

⇒Summary: seq-len = 67087 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 40971-41197 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUQ01000042.1 Clostridioides difficile strain LC1-24-1110 NODE_42_length_20750_cov_16.1825, whole genome shotgun sequence

⇒Summary: seq-len = 20750 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15413-15639 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWUQ01000053.1 Clostridioides difficile strain LC1-24-1110 NODE_53_length_10583_cov_26.5915, whole genome shotgun sequence

⇒Summary: seq-len = 10583 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5901-6125 bp]: array | spacers
           [Locus range 9588-10407 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)