CRISPRone

CRISPRone report for GCA_007000945.1_ASM700094v1

♦ Seq 1: QWUT01000445.1 Clostridioides difficile strain LC1-24-0222 NODE_445_length_250_cov_1.90244, whole genome shotgun sequence

⇒Summary: seq-len = 250 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-77 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUT01000279.1 Clostridioides difficile strain LC1-24-0222 NODE_279_length_3432_cov_3.65809, whole genome shotgun sequence

⇒Summary: seq-len = 3432 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 596-955 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUT01000352.1 Clostridioides difficile strain LC1-24-0222 NODE_352_length_1636_cov_5.62293, whole genome shotgun sequence

⇒Summary: seq-len = 1636 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 501-1646 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUT01000120.1 Clostridioides difficile strain LC1-24-0222 NODE_120_length_11394_cov_6.20751, whole genome shotgun sequence

⇒Summary: seq-len = 11394 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10075-11291 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUT01000076.1 Clostridioides difficile strain LC1-24-0222 NODE_76_length_16650_cov_5.3618, whole genome shotgun sequence

⇒Summary: seq-len = 16650 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10773-11332 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUT01000082.1 Clostridioides difficile strain LC1-24-0222 NODE_82_length_15246_cov_9.74198, whole genome shotgun sequence

⇒Summary: seq-len = 15246 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10141-10365 bp]: array | spacers
           [Locus range 13828-14647 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUT01000025.1 Clostridioides difficile strain LC1-24-0222 NODE_25_length_27679_cov_7.24466, whole genome shotgun sequence

⇒Summary: seq-len = 27679 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUT01000253.1 Clostridioides difficile strain LC1-24-0222 NODE_253_length_4131_cov_4.99975, whole genome shotgun sequence

⇒Summary: seq-len = 4131 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2924-3939 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUT01000186.1 Clostridioides difficile strain LC1-24-0222 NODE_186_length_6971_cov_5.55625, whole genome shotgun sequence

⇒Summary: seq-len = 6971 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-882 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUT01000034.1 Clostridioides difficile strain LC1-24-0222 NODE_34_length_25135_cov_6.17266, whole genome shotgun sequence

⇒Summary: seq-len = 25135 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 19214-20885 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUT01000226.1 Clostridioides difficile strain LC1-24-0222 NODE_226_length_5108_cov_7.09837, whole genome shotgun sequence

⇒Summary: seq-len = 5108 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13-241 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWUT01000406.1 Clostridioides difficile strain LC1-24-0222 NODE_406_length_603_cov_7.93908, whole genome shotgun sequence

⇒Summary: seq-len = 603 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 179-338 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: QWUT01000092.1 Clostridioides difficile strain LC1-24-0222 NODE_92_length_14312_cov_9.19373, whole genome shotgun sequence

⇒Summary: seq-len = 14312 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9997-10555 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)