CRISPRone

CRISPRone report for GCA_007000965.1_ASM700096v1

♦ Seq 1: QWUR01000008.1 Clostridioides difficile strain LC1-24-0909 NODE_8_length_138552_cov_22.6371, whole genome shotgun sequence

⇒Summary: seq-len = 138552 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: QWUR01000048.1 Clostridioides difficile strain LC1-24-0909 NODE_48_length_6187_cov_27.7779, whole genome shotgun sequence

⇒Summary: seq-len = 6187 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5194-6011 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: QWUR01000025.1 Clostridioides difficile strain LC1-24-0909 NODE_25_length_50598_cov_14.4342, whole genome shotgun sequence

⇒Summary: seq-len = 50598 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 45274-45500 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: QWUR01000018.1 Clostridioides difficile strain LC1-24-0909 NODE_18_length_88115_cov_18.3832, whole genome shotgun sequence

⇒Summary: seq-len = 88115 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 61240-62980 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: QWUR01000013.1 Clostridioides difficile strain LC1-24-0909 NODE_13_length_110356_cov_21.5205, whole genome shotgun sequence

⇒Summary: seq-len = 110356 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4088-4644 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: QWUR01000039.1 Clostridioides difficile strain LC1-24-0909 NODE_39_length_11048_cov_31.2286, whole genome shotgun sequence

⇒Summary: seq-len = 11048 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6366-6590 bp]: array | spacers
           [Locus range 10053-10872 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: QWUR01000017.1 Clostridioides difficile strain LC1-24-0909 NODE_17_length_88320_cov_18.7228, whole genome shotgun sequence

⇒Summary: seq-len = 88320 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 48964-49723 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: QWUR01000001.1 Clostridioides difficile strain LC1-24-0909 NODE_1_length_462394_cov_23.2909, whole genome shotgun sequence

⇒Summary: seq-len = 462394 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 67399-67820 bp]: array | spacers
           [Locus range 271355-271781 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: QWUR01000103.1 Clostridioides difficile strain LC1-24-0909 NODE_103_length_591_cov_17.7004, whole genome shotgun sequence

⇒Summary: seq-len = 591 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 268-494 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: QWUR01000023.1 Clostridioides difficile strain LC1-24-0909 NODE_23_length_69037_cov_22.3908, whole genome shotgun sequence

⇒Summary: seq-len = 69037 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7737-7831 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: QWUR01000089.1 Clostridioides difficile strain LC1-24-0909 NODE_89_length_920_cov_18.9508, whole genome shotgun sequence

⇒Summary: seq-len = 920 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 268-823 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: QWUR01000004.1 Clostridioides difficile strain LC1-24-0909 NODE_4_length_267223_cov_20.741, whole genome shotgun sequence

⇒Summary: seq-len = 267223 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 166719-166945 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)